ncRNA ID | novel_gar_miR38 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr5:29615543-29615628 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587;SRR1029586 |
Length | 24 |
Mature sequence(if miRNA) | 63 - GAUUAAGCCCGGACGGGUGAUCCU - 86 |
Stem-loop(if miRNA) |
--    AA     GA     --     UAUCCUG     GCCC  U   GAUU  GCCCG  CGGGU  GAUCC       AUAUA    UC C   ||||  |||||  |||||  |||||       |||||    || G   CUAA  UGGGC  GCCCG  UUAGG       UGUGU    AG A GU    --     AG     AU     --UAAAA     -AUA  A |
Stem-loop sequence | GAUUAAGCCCGGACGGGUGAUCCUAUCCUGAUAUAGCCCUCUCGAAGAAUAUGUGUAAAAUGGAUUUAGCCCGGACGGGUAAUCUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017775300.1 |
|
2.0 | PREDICTED: Gossypium arboreum cytochrome P450 86A8-like (LOC108473626), mRNA | cytochrome P450 86A8-like(LOC108473626) | coding protein | psRNATarget |