ncRNA ID | novel_gar_miR34 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr10:66294695-66294750 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587;SRR1029588 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUGUGACACGCUGGAUUCGGUCAU - 24 |
Stem-loop(if miRNA) |
--A        G UG         AUAA    UGUGACAC C  GAUUCGGUC    U    |||||||| |  |||||||||    ACAUUGUG G  UUGGGUCGG    G AAG        G GU         GUUU |
Stem-loop sequence | AUGUGACACGCUGGAUUCGGUCAUAAUGUUUGGGCUGGGUUUGGGGUGUUACAGAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017762242.1 |
|
2.0 | PREDICTED: Gossypium arboreum metallophosphoesterase 1-like (LOC108462268), transcript variant X1, mRNA | metallophosphoesterase 1-like(LOC108462268) | coding protein | psRNATarget |