Search result

BaseInfo

ncRNA ID novel_gar_miR34
Species Gossypium arboreum
Class miRNA
Genome position Chr10:66294695-66294750 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587;SRR1029588
Length 24
Mature sequence(if miRNA) 1 - AUGUGACACGCUGGAUUCGGUCAU - 24
Stem-loop(if miRNA) --A        G UG         AUAA
   UGUGACAC C  GAUUCGGUC    U
   |||||||| |  |||||||||
   ACAUUGUG G  UUGGGUCGG    G
AAG        G GU         GUUU
Stem-loop sequence AUGUGACACGCUGGAUUCGGUCAUAAUGUUUGGGCUGGGUUUGGGGUGUUACAGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_017762242.1
ncRNA:24   UACUGG-CUUAGGUCGCACAGUGUA   1
  *|||||-||||||||||||||||||
targets:1806   UUGACCCGAAUCCAGCGUGUCACAU   1830

2.0 PREDICTED: Gossypium arboreum metallophosphoesterase 1-like (LOC108462268), transcript variant X1, mRNA metallophosphoesterase 1-like(LOC108462268) coding protein psRNATarget