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BaseInfo

ncRNA ID novel_gar_miR28
Species Gossypium arboreum
Class miRNA
Genome position Chr4:66435971-66436077 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587;SRR1029588;SRR1029586
Length 24
Mature sequence(if miRNA) 1 - AAGAGUGAGGAUGGAGAAUUUGCU - 24
Stem-loop(if miRNA) --  G                   C     AAAU      UA   A   UCACU
  AA AGUGAGGAUGGAGAAUUUG UAAUC    GGUUAA  UUC UAA     U
  || ||||||||||||||||||| |||||    ||||||  ||| |||     U
  UU UCACUCCUACUUUUUAAAC AUUAG    CCAAUU  GAG AUU     C
UU  G                   A     AGAU      -C   -   UUAUC
Stem-loop sequence AAGAGUGAGGAUGGAGAAUUUGCUAAUCAAAUGGUUAAUAUUCAUAAUCACUUUCCUAUUUUAGAGCUUAACCUAGAGAUUAACAAAUUUUUCAUCCUCACUGUUUU