ncRNA ID | novel_gar_miR26 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr4:57527919-57527984 [+] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAAGAUUGGUGGCGACUCCAUGU - 24 |
Stem-loop(if miRNA) |
--       U  U  -     CC     CGUUUU   AAAAGAU GG GG CGACU  AUGUU      C   ||||||| || || |||||  |||||   UUUUUUG CC CU GCUGA  UAUAA      U AC       C  -  A     AA     AACUUU |
Stem-loop sequence | AAAAGAUUGGUGGCGACUCCAUGUUCGUUUUCUUUUCAAAAUAUAAAGUCGAUCCCCGUUUUUUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017754579.1 |
|
2.5 | PREDICTED: Gossypium arboreum uncharacterized LOC108455991 (LOC108455991), mRNA | uncharacterized LOC108455991(LOC108455991) | coding protein | psRNATarget | |||||||||
XM_017762305.1 |
|
3.0 | PREDICTED: Gossypium arboreum UPF0481 protein At3g47200-like (LOC108462343), mRNA | UPF0481 protein At3g47200-like(LOC108462343) | coding protein | psRNATarget |