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BaseInfo

ncRNA ID novel_gar_miR21
Species Gossypium arboreum
Class miRNA
Genome position Chr10:62194162-62194312 [+]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 1 - ACGUGGAUUGCAAUGUGCAUGACA - 24
Stem-loop(if miRNA) --           A     C         CAA             U       --         UCAAUAA     A
  ACGUGGAUUGC AUGUG AUGACAUAU   CAUUUAAUUAAUU UUUAAAA  UUUAAAAGU       AAUAU A
  ||||||||||| ||||| |||||||||   ||||||||||||| |||||||  |||||||||       ||||| A
  UGUACUUAACG UGUAU UAUUGUGUA   GUAAAUUAAUUAA AAAUUUU  AAAUUUUUA       UUAUG A
UG           G     -         AUC             C       UA         -UAAAAA     U
Stem-loop sequence ACGUGGAUUGCAAUGUGCAUGACAUAUCAACAUUUAAUUAAUUUUUUAAAAUUUAAAAGUUCAAUAAAAUAUAAAAUGUAUUAAAAAUAUUUUUAAAAUUUUUAAACAAUUAAUUAAAUGCUAAUGUGUUAUUAUGUGGCAAUUCAUGUGU