ncRNA ID | novel_gar_miR17 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr4:4126877-4127043 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587 |
Length | 24 |
Mature sequence(if miRNA) | 144 - UAGGUCGAUCUAUAGCGGCGCUUU - 167 |
Stem-loop(if miRNA) |
--   -GUC              C   C       -           GA      AGAACGACGUCUAUUUUGA   UCAGUGGCAUUAGCGG   UAG    GAUCUAUAGCGGCG UUU UUAAAAA UGCCGCUAAAA  UUAAAC                   GCU                C   |||    |||||||||||||| ||| ||||||| |||||||||||  ||||||                   |||   AUC    CUAGAUAUCGCCGU AAA AGUUUUU GCGGCGAUUUU  GGUUUG                   CGC                G UU   AAAU              -   A       C           -G      ---------------AUAA   CGCAAAAGACUCCUUC |
Stem-loop sequence | UAGGUCGAUCUAUAGCGGCGCUUUCUUAAAAAUGCCGCUAAAAGAUUAAACAGAACGACGUCUAUUUUGAGCUUCAGUGGCAUUAGCGGCGCUUCCUCAGAAAACGCCGCAAUAGUUUGGGUUUUAGCGGCGCUUUUUGAAAAAUGCCGCUAUAGAUCUAAACUAUU |