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BaseInfo

ncRNA ID novel_gar_miR17
Species Gossypium arboreum
Class miRNA
Genome position Chr4:4126877-4127043 [-]
Reference genome Gossypium_arboreum_v1.0
Source SRR1029587
Length 24
Mature sequence(if miRNA) 144 - UAGGUCGAUCUAUAGCGGCGCUUU - 167
Stem-loop(if miRNA) --   -GUC              C   C       -           GA      AGAACGACGUCUAUUUUGA   UCAGUGGCAUUAGCGG
  UAG    GAUCUAUAGCGGCG UUU UUAAAAA UGCCGCUAAAA  UUAAAC                   GCU                C
  |||    |||||||||||||| ||| ||||||| |||||||||||  ||||||                   |||
  AUC    CUAGAUAUCGCCGU AAA AGUUUUU GCGGCGAUUUU  GGUUUG                   CGC                G
UU   AAAU              -   A       C           -G      ---------------AUAA   CGCAAAAGACUCCUUC
Stem-loop sequence UAGGUCGAUCUAUAGCGGCGCUUUCUUAAAAAUGCCGCUAAAAGAUUAAACAGAACGACGUCUAUUUUGAGCUUCAGUGGCAUUAGCGGCGCUUCCUCAGAAAACGCCGCAAUAGUUUGGGUUUUAGCGGCGCUUUUUGAAAAAUGCCGCUAUAGAUCUAAACUAUU