ncRNA ID | novel_gar_miR12 |
Species | Gossypium arboreum |
Class | miRNA |
Genome position | Chr4:15224803-15224879 [-] |
Reference genome | Gossypium_arboreum_v1.0 |
Source | SRR1029587;SRR1029588;SRR1029586;SRR3180721 |
Length | 24 |
Mature sequence(if miRNA) | 54 - AUACUGUAUUCCUUUGAAACAAGC - 77 |
Stem-loop(if miRNA) |
--    U  A   C         AGC    --  UG  GU   AUAC GU UUC UUUGAAACA   GAAU  CU  AA  C   |||| || ||| |||||||||   ||||  ||  ||   UAUG UA AAG AAAUUUUGU   CUUA  GA  UU  U UU    C  -   A         GAA    CU  GU  AA |
Stem-loop sequence | AUACUGUAUUCCUUUGAAACAAGCGAAUCUUGAAGUCUAAUUUGAGUCAUUCAAGUGUUUUAAAAGAAAUCGUAUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_017767062.1 |
|
2.5 | PREDICTED: Gossypium arboreum potassium transporter 5 (LOC108466688), mRNA | potassium transporter 5(LOC108466688) | coding protein | psRNATarget |