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BaseInfo

ncRNA ID	novel_gar_miR1
Species	Gossypium arboreum
Class	miRNA
Genome position	Chr12:94340771-94340976 [+]
Reference genome	Gossypium_arboreum_v1.0
Source	SRR1029586
Length	24
Mature sequence(if miRNA)	1 - AGGAUUCUAUGAAACAGGGACGUC - 24
Stem-loop(if miRNA)	--      C             --C  CACGUUACUUGUAUUUUUUUUCAAUAGUUUUAUGCUACAUUAGUAUUUUCAUCCCGAAUUUCAGUAUUUUCAUCCUG   AGGAUU UAUGAAACAGGGA   GU                                                                             A   |||||| |||||||||||||   ||   UCCUAA AUACUUUGUCUCU   AU                                                                             A UU      C             AUA  AAUUGAAGGUUAUCAAAAUAGGGUGUAGUCAUUGAAAUAGGACUUAAAGUCCUAAAAUUAAAUCUAAACUAAAAAAA
Stem-loop sequence	AGGAUUCUAUGAAACAGGGACGUCACGUUACUUGUAUUUUUUUUCAAUAGUUUUAUGCUACAUUAGUAUUUUCAUCCCGAAUUUCAGUAUUUUCAUCCUGAAAAAAAAAUCAAAUCUAAAUUAAAAUCCUGAAAUUCAGGAUAAAGUUACUGAUGUGGGAUAAAACUAUUGGAAGUUAAUAAUAUCUCUGUUUCAUACAAUCCUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_017758885.1	ncRNA:24   CUGCAGGGACAAAGUAUCUUAGGA   1   |=||||*||||||||||*|||||| targets:1532   GGCGUCACUGUUUCAUACAAUCCU   1555 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum enolase-like (LOC108459500), mRNA	enolase-like(LOC108459500)	coding protein	psRNATarget
XM_017758885.1	ncRNA:24   CUGCAGGGACAAAGUAUCUUAGGA   1   |==|||*||||||||||*|||||| targets:1801   GGUGUCACUGUUUCAUACAAUCCU   1824 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum enolase-like (LOC108459500), mRNA	enolase-like(LOC108459500)	coding protein	psRNATarget
XM_017779128.1	ncRNA:24   CUGCAGGGACAAAGUAUCUUAGGA   1   **|*||||||||||||*||||||* targets:986   CUCCUCCCUGUUUCAUCGAAUCCA   1009 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum NAC domain-containing protein 100-like (LOC108476796), transcript variant X1, mRNA	NAC domain-containing protein 100-like(LOC108476796)	coding protein	psRNATarget
XM_017779129.1	ncRNA:24   CUGCAGGGACAAAGUAUCUUAGGA   1   **|*||||||||||||*||||||* targets:1035   CUCCUCCCUGUUUCAUCGAAUCCA   1058 Target Full Sequence	2.5	PREDICTED: Gossypium arboreum NAC domain-containing protein 100-like (LOC108476796), transcript variant X2, mRNA	NAC domain-containing protein 100-like(LOC108476796)	coding protein	psRNATarget