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BaseInfo

ncRNA ID novel_egu_miR917
Species Elaeis guineensis
Class miRNA
Genome position Chr7:2711936-2712059 [-]
Reference genome EG5
Source SRR5189964
Length 22
Mature sequence(if miRNA) 1 - GCGGGUGGGACGCGGAGGGGGC - 22
Stem-loop(if miRNA) --          -   -  UA      G    C C   C    GC          G -    CG
  UCCUUUCGUG CCC CC  CGCCAU GGCU G GCG UGGG  CCAUGCGCUG A CUGG  A
  |||||||||| ||| ||  |||||| |||| | ||| ||||  |||||||||| | ||||  U
  GGGGAGGCGC GGG GG  GCGGUG CCGG C CGC ACUC  GGUGCGCGAC U GGCC  G
CG          A   U  --      G    U A   U    UC          G C    UC
Stem-loop sequence UCCUUUCGUGCCCCCUACGCCAUGGGCUCGCGCGCUGGGGCCCAUGCGCUGGACUGGCGAUGCUCCGGCUGCAGCGCGUGGCUCUCAUCGCACUGGCCGGUGGCGGGUGGGACGCGGAGGGGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01019954.1
ncRNA:22   CGGGGGAGGCGCAGGGUGGGCG   1
  ||||||||||||||||||||||
targets:1565   GCCCCCUCCGCGUCCCACCCGC   1586

0.0 TSA: Elaeis guineensis Unigene1782_All transcribed RNA sequence NA coding protein psRNATarget