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BaseInfo

ncRNA ID novel_egu_miR915
Species Elaeis guineensis
Class miRNA
Genome position Chr7:11816355-11816533 [-]
Reference genome EG5
Source SRR5189964
Length 24
Mature sequence(if miRNA) 156 - UUUGAAUGACGAAAAUGCUCCUAU - 179
Stem-loop(if miRNA) --         C            A       A    AAUUACGAGCAU                   -           C  AU GA       U
  UUUGAAUGA GAAAAUGCUCCU UUUUUUU AAAA            AUUAUGAUAUUCUGUGUUA UAUUAUGACAU UU  G  CAAAAAU A
  ||||||||| |||||||||||| ||||||| ||||            ||||||||||||||||||| ||||||||||| ||  |  |||||||
  AAACUUACU CUUUUAUGAGGA AAGAAAA UUUU            UAAUACUGUAAGAUACAGU AUAAUACUGUA AA  U  GUUUUUA U
UA         A            A       C    ------------                   U           A  CG AG       G
Stem-loop sequence UUUGAAUGACGAAAAUGCUCCUAUUUUUUUAAAAAAAUUACGAGCAUAUUAUGAUAUUCUGUGUUAUAUUAUGACAUCUUAUGGACAAAAAUUAUGAUUUUUGGAUGCAAAAUGUCAUAAUAUUGACAUAGAAUGUCAUAAUUUUUCAAAAGAAAAGGAGUAUUUUCAUCAUUCAAAAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019853582.1
ncRNA:24   UAUCCUCGUAAAAGCAGUAAGUUU   1
  =*|||=||||||||||*|||||||
targets:8   GGAGGGGCAUUUUCGUAAUUCAAA   31

2.5 PREDICTED: Elaeis guineensis rop guanine nucleotide exchange factor 14 (LOC105053520), transcript variant X2, mRNA NA coding protein psRNATarget