ncRNA ID | novel_egu_miR915 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr7:11816355-11816533 [-] |
Reference genome | EG5 |
Source | SRR5189964 |
Length | 24 |
Mature sequence(if miRNA) | 156 - UUUGAAUGACGAAAAUGCUCCUAU - 179 |
Stem-loop(if miRNA) |
--         C            A       A    AAUUACGAGCAU                   -           C  AU GA       U   UUUGAAUGA GAAAAUGCUCCU UUUUUUU AAAA            AUUAUGAUAUUCUGUGUUA UAUUAUGACAU UU  G  CAAAAAU A   ||||||||| |||||||||||| ||||||| ||||            ||||||||||||||||||| ||||||||||| ||  |  |||||||   AAACUUACU CUUUUAUGAGGA AAGAAAA UUUU            UAAUACUGUAAGAUACAGU AUAAUACUGUA AA  U  GUUUUUA U UA         A            A       C    ------------                   U           A  CG AG       G |
Stem-loop sequence | UUUGAAUGACGAAAAUGCUCCUAUUUUUUUAAAAAAAUUACGAGCAUAUUAUGAUAUUCUGUGUUAUAUUAUGACAUCUUAUGGACAAAAAUUAUGAUUUUUGGAUGCAAAAUGUCAUAAUAUUGACAUAGAAUGUCAUAAUUUUUCAAAAGAAAAGGAGUAUUUUCAUCAUUCAAAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019853582.1 |
|
2.5 | PREDICTED: Elaeis guineensis rop guanine nucleotide exchange factor 14 (LOC105053520), transcript variant X2, mRNA | NA | coding protein | psRNATarget |