ncRNA ID | novel_egu_miR903 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr6:38662352-38662454 [+] |
Reference genome | EG5 |
Source | SRR5189964 |
Length | 24 |
Mature sequence(if miRNA) | 80 - GUGUUGAGCUCUGAUUUUUGGCAU - 103 |
Stem-loop(if miRNA) |
---G      A U         C   G  -------       AAGGAA        U     CAAAGA C GGGCUCAGC ACU GA       GGUGGGG      GAUCUUCU G     |||||| | ||||||||| ||| ||       |||||||      |||||||| A     GUUUUU G CUCGAGUUG UGA CU       UCGCUCC      UUAGAAGG U UACG      A U         -   G  GUCCUAG       -----G        A |
Stem-loop sequence | GCAAAGAACUGGGCUCAGCCACUGGAGGUGGGGAAGGAAGAUCUUCUUGAUAGGAAGAUUGCCUCGCUGAUCCUGUCGAGUGUUGAGCUCUGAUUUUUGGCAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010929823.1 |
|
1.5 | PREDICTED: Elaeis guineensis probable LRR receptor-like serine/threonine-protein kinase At4g26540 (LOC105049982), mRNA | NA | coding protein | psRNATarget | |||||||||
GBSV01031305.1 |
|
2.5 | TSA: Elaeis guineensis Unigene13138_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
XM_010932910.2 |
|
2.5 | PREDICTED: Elaeis guineensis uncharacterized protein At3g49720 (LOC105052176), transcript variant X3, mRNA | NA | coding protein | psRNATarget |