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BaseInfo

ncRNA ID novel_egu_miR902
Species Elaeis guineensis
Class miRNA
Genome position Chr5:19147012-19147182 [+]
Reference genome EG5
Source SRR5189964
Length 24
Mature sequence(if miRNA) 1 - UUGAAUGACGAAAAUACCCCUGCU - 24
Stem-loop(if miRNA) --        C               A    A          U  C     U UU              --CUU G    A     A
  UUGAAUGA GAAAAUACCCCUGCU UUUG AAAAGAUUAU AU UCUUA G  CAUAUUAUGACAUC     U AAAA UGUAA A
  |||||||| ||||||||||||||| |||| |||||||||| || ||||| |  ||||||||||||||     | |||| |||||
  GACUUACU CUUUUAUGGGGAUGA AAAU UUUUUUAAUA UA AGGAU C  GUAUAAUACUGUAG     A UUUU AUAUU A
AA        A               G    C          C  U     - UC              AACAU G    A     A
Stem-loop sequence UUGAAUGACGAAAAUACCCCUGCUAUUUGAAAAAGAUUAUUAUCUCUUAUGUUCAUAUUAUGACAUCCUUUGAAAAAUGUAAAAAAUUAUAAUUUUGAUACAAGAUGUCAUAAUAUGCUCUAGGAUAUCAUAAUUUUUUCUAAAGAGUAGGGGUAUUUUCAUCAUUCAGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019853582.1
ncRNA:24   UCGUCCCCAUAAAAGCAGUAAGUU   1
  ||*|||||*||||||||*||||||
targets:7   AGGAGGGGCAUUUUCGUAAUUCAA   30

2.5 PREDICTED: Elaeis guineensis rop guanine nucleotide exchange factor 14 (LOC105053520), transcript variant X2, mRNA NA coding protein psRNATarget