ncRNA ID | novel_egu_miR902 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr5:19147012-19147182 [+] |
Reference genome | EG5 |
Source | SRR5189964 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUGAAUGACGAAAAUACCCCUGCU - 24 |
Stem-loop(if miRNA) |
--        C               A    A          U  C     U UU              --CUU G    A     A   UUGAAUGA GAAAAUACCCCUGCU UUUG AAAAGAUUAU AU UCUUA G  CAUAUUAUGACAUC     U AAAA UGUAA A   |||||||| ||||||||||||||| |||| |||||||||| || ||||| |  ||||||||||||||     | |||| |||||   GACUUACU CUUUUAUGGGGAUGA AAAU UUUUUUAAUA UA AGGAU C  GUAUAAUACUGUAG     A UUUU AUAUU A AA        A               G    C          C  U     - UC              AACAU G    A     A |
Stem-loop sequence | UUGAAUGACGAAAAUACCCCUGCUAUUUGAAAAAGAUUAUUAUCUCUUAUGUUCAUAUUAUGACAUCCUUUGAAAAAUGUAAAAAAUUAUAAUUUUGAUACAAGAUGUCAUAAUAUGCUCUAGGAUAUCAUAAUUUUUUCUAAAGAGUAGGGGUAUUUUCAUCAUUCAGAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019853582.1 |
|
2.5 | PREDICTED: Elaeis guineensis rop guanine nucleotide exchange factor 14 (LOC105053520), transcript variant X2, mRNA | NA | coding protein | psRNATarget |