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BaseInfo

ncRNA ID novel_egu_miR888
Species Elaeis guineensis
Class miRNA
Genome position Chr4:21218258-21218346 [+]
Reference genome EG5
Source SRR5189964
Length 24
Mature sequence(if miRNA) 1 - AGAGGACAGACUCAACAAACUGAA - 24
Stem-loop(if miRNA) --A       -  C   A       AAGAAA      -   CU   ACC
   GAGGACA GA UCA CAAACUG      GAUGAU CUU  AGG   A
   ||||||| || ||| |||||||      |||||| |||  |||
   UUUCUGU CU AGU GUUUGAC      CUAUUA GAG  UUC   U
GAA       G  A   -       ------      A   UU   AGU
Stem-loop sequence AGAGGACAGACUCAACAAACUGAAGAAAGAUGAUCUUCUAGGACCAUUGACUUUUGAGAAUUAUCCAGUUUGUGAAUCGUGUCUUUAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010911488.1
ncRNA:24   AAGUCAAACAACUCAGACAGGAGA   1
  ||=||*|||||||||||||=||||
targets:1322   UUUAGGUUGUUGAGUCUGUUCUCU   1345

2.5 PREDICTED: Elaeis guineensis ankyrin repeat domain-containing protein 2A (LOC105035787), mRNA NA coding protein psRNATarget