ncRNA ID | novel_egu_miR888 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr4:21218258-21218346 [+] |
Reference genome | EG5 |
Source | SRR5189964 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAGGACAGACUCAACAAACUGAA - 24 |
Stem-loop(if miRNA) |
--A       -  C   A       AAGAAA      -   CU   ACC    GAGGACA GA UCA CAAACUG      GAUGAU CUU  AGG   A    ||||||| || ||| |||||||      |||||| |||  |||    UUUCUGU CU AGU GUUUGAC      CUAUUA GAG  UUC   U GAA       G  A   -       ------      A   UU   AGU |
Stem-loop sequence | AGAGGACAGACUCAACAAACUGAAGAAAGAUGAUCUUCUAGGACCAUUGACUUUUGAGAAUUAUCCAGUUUGUGAAUCGUGUCUUUAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010911488.1 |
|
2.5 | PREDICTED: Elaeis guineensis ankyrin repeat domain-containing protein 2A (LOC105035787), mRNA | NA | coding protein | psRNATarget |