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BaseInfo

ncRNA ID	novel_egu_miR885
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr11:8708172-8708219 [+]
Reference genome	EG5
Source	SRR5189964
Length	20
Mature sequence(if miRNA)	1 - AGAUUGGUUGGUUGGCAUUU - 20
Stem-loop(if miRNA)	--  AUU   U      -      A   AG   GGU GGUUGG CAUUUG A   ||   ||| |||||| ||||||   UC   CCA CCAACU GUGAAC U UU  GAU   -      A      U
Stem-loop sequence	AGAUUGGUUGGUUGGCAUUUGAAUUCAAGUGAUCAACCACCUAGCUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GBSV01028602.1	ncRNA:20   UUUACGGUUGGUUGGUUAGA   1   ||||||*|||*||||||||| targets:146   AAAUGCAAACAAACCAAUCU   165 Target Full Sequence	2.5	TSA: Elaeis guineensis Unigene10435_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_019848478.1	ncRNA:20   UUUACGGUUGGUUGGUUAGA   1   =||*|||*|||||||||||| targets:2297   GAAGGCCUACCAACCAAUCU   2316 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis putative disease resistance protein At3g14460 (LOC105040148), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_019848480.1	ncRNA:20   UUUACGGUUGGUUGGUUAGA   1   =||*|||*|||||||||||| targets:2297   GAAGGCCUACCAACCAAUCU   2316 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis putative disease resistance protein At3g14460 (LOC105040148), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_019848479.1	ncRNA:20   UUUACGGUUGGUUGGUUAGA   1   =||*|||*|||||||||||| targets:2297   GAAGGCCUACCAACCAAUCU   2316 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis putative disease resistance protein At3g14460 (LOC105040148), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010942053.2	ncRNA:20   UUUA-CGGUUGGUUGGUUAGA   1   **||-|||||||||||||||| targets:193   CCAUCGCCAACCAACCAAUCU   213 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis pentatricopeptide repeat-containing protein At5g66520-like (LOC105058963), mRNA	NA	coding protein	psRNATarget