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BaseInfo

ncRNA ID novel_egu_miR882
Species Elaeis guineensis
Class miRNA
Genome position Chr1:55005611-55005658 [+]
Reference genome EG5
Source SRR5189964
Length 21
Mature sequence(if miRNA) 1 - GCAACAAGUGGUAUCAGAGCA - 21
Stem-loop(if miRNA) ---G      -G      C    CA
    CAACAA  UGGUAU AGAG  G
    ||||||  |||||| ||||
    GUUGUU  AUUAUA UCUC  G
UCUA      AG      A    AU
Stem-loop sequence GCAACAAGUGGUAUCAGAGCAGGUACUCUAAUAUUAGAUUGUUGAUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01017255.1
ncRNA:21   ACGAGACUAUGGUGAACAACG   1
  ||||||||||||||||||||*
targets:616   UGCUCUGAUACCACUUGUUGG   636

1.0 TSA: Elaeis guineensis CL6532.Contig1_All transcribed RNA sequence NA coding protein psRNATarget