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BaseInfo

ncRNA ID	ath-miRf10937-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - UCGACCUCGUGGUCGAGUGGU - NA
Stem-loop(if miRNA)	GA            U          -U     G A GAG  CACUCGACCUCG GGUCGAGUGG  GAGGU A G |||  |||||||||||| ||||||||||  ||||| | U CUC  GUGAGCUGGGGU CUAGCUCAUC  CUUUA U G    UG            U          UU     G G
Stem-loop sequence	GAGGACACUCGACCUCGUGGUCGAGUGGUGAGGUGAAGUGGUGAUUUCUUCUACUCGAUCUUGGGGUCGAGUGGUCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_103391.1	ncRNA:21   UGGUGAGCUGGUGCUCCAGCU   1   ||||||||||||||||||||| targets:1149   ACCACUCGACCACGAGGUCGA   1169 Target Full Sequence	0.0	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
EF183042.1	ncRNA:21   UGGUGAGCUGGUGCUCCAGCU   1   ||||||||||||||||||||| targets:1525   ACCACUCGACCACGAGGUCGA   1545 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:21   UGGUGAGCUGGUGCUCCAGCU   1   |*|||||||||*||||||||| targets:1058   AGCACUCGACCCCGAGGUCGA   1078 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
EF183042.1	ncRNA:21   UGGUGAGCUGGUGCUCCAGCU   1   |=|||||||||*||||||||| targets:1616   AUCACUCGACCCCGAGGUCGA   1636 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183194.1	ncRNA:21   UGGUGAGCUGGUGCUCCAGCU   1   |||||||||||||*||||||| targets:448   ACCACUCGACCACCAGGUCGA   468 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183194.1	ncRNA:21   UGGUGAGCUGGUGCUCCAGCU   1   *=||||||||||=|||||||| targets:515   UUCACUCGACCAUGAGGUCGA   535 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
AY227642.1	ncRNA:21   UGGUGAGCUGGUGCUCCAGCU   1   |||||||||||*||||||||| targets:853   ACCACUCGACCCCGAGGUCGA   873 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183005.1	ncRNA:21   UGGUGAGCUGGUGCUCCAGCU   1   =*||||||||||||=|||||| targets:1922   GGCACUCGACCACGGGGUCGA   1942 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183005.1	ncRNA:21   UGGUGAGCUGGUGCUCCAGCU   1   =*|||||||||*||||||||| targets:1863   GGCACUCGACCUCGAGGUCGA   1883 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:21   UGGUGAGCUGGUGCUCCAGCU   1   |||||||*|||||*||||||| targets:43   ACCACUCAACCACAAGGUCGA   63 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget