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BaseInfo

ncRNA ID	novel_egu_miR876
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr3:12279495-12279669 [-]
Reference genome	EG5
Source	SRR5189964
Length	20
Mature sequence(if miRNA)	1 - CUUGGAUUGAAGGGAGCUCC - 20
Stem-loop(if miRNA)	--                 UC  C   -----   UA      UGUAC   G  G    U     AA  U       -        GG    AGG   AGCUCCCUUCAAUCCAA  CA GAG     GGU  GCGGGG     ACG CU CUGG UCAUG  UA ACCUUUG GGUGCACC  CUCG   G   |||||||||||||||||  || |||     |||  ||||||     ||| || |||| |||||  || ||||||| ||||||||  ||||   UCGAGGGAAGUUAGGUU  GU CUC     CCG  CGUUCC     UGC GA GACC AGUAC  GU UGGGGAC CCACGUGG  GAGU   A CC                 -C  U   UUUUU   UC      -----   A  G    C     GG  -       U        --    AGA
Stem-loop sequence	AGCUCCCUUCAAUCCAAUCCACGAGGGUUAGCGGGGUGUACACGGCUGCUGGUUCAUGAAUAUACCUUUGGGUGCACCGGCUCGAGGGAAGAUGAGGGUGCACCUCAGGGGUUGGGCAUGACCCAGGAGACGUCCUUGCCUGCCUUUUUCUCUUGCUUGGAUUGAAGGGAGCUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GBSV01050784.1	ncRNA:20   CCUCGAGGGAAGUUAGGUUC   1   |*|||||||||||||||||| targets:190   GCAGCUCCCUUCAAUCCAAG   209 Target Full Sequence	1.0	TSA: Elaeis guineensis Unigene32626_All transcribed RNA sequence	NA	coding protein	psRNATarget
GBSV01042861.1	ncRNA:20   CCUCGAGGGAAGUUAGGUUC   1   *||||||||||||||||||* targets:47   AGAGCUCCCUUCAAUCCAAA   66 Target Full Sequence	1.0	TSA: Elaeis guineensis Unigene24702_All transcribed RNA sequence	NA	coding protein	psRNATarget
JO094254.1	ncRNA:20   CCUCGAGGGAAGUUAGGUUC   1   *||||||||||||||||||* targets:224   AGAGCUCCCUUCAAUCCAAA   243 Target Full Sequence	1.0	TSA: Elaeis guineensis isotig06997.Elguifruit mRNA sequence	NA	coding protein	psRNATarget
GBSV01039632.1	ncRNA:20   CCUCGAGGGAAGUUAGGUUC   1   |||||||||||||*|||||* targets:192   GGAGCUCCCUUCACUCCAAU   211 Target Full Sequence	2.5	TSA: Elaeis guineensis Unigene21469_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010924668.2	ncRNA:20   CCUCGAGGGAAGUUAGGUUC   1   |||||||||||||*|||||* targets:1046   GGAGCUCCCUUCACUCCAAU   1065 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis transcription factor GAMYB (LOC105046145), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_019850771.1	ncRNA:20   CCUCGAGGGAAGUUAGGUUC   1   |||||||||||||*|||||* targets:1062   GGAGCUCCCUUCACUCCAAU   1081 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis transcription factor GAMYB (LOC105046145), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010924669.2	ncRNA:20   CCUCGAGGGAAGUUAGGUUC   1   |||||||||||||*|||||* targets:1107   GGAGCUCCCUUCACUCCAAU   1126 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis transcription factor GAMYB (LOC105046145), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010906429.2	ncRNA:20   CCUCGAGGGAAGUUAGGUUC   1   |||||||||||||*|||||* targets:1046   GGAGCUCCCUUCACUCCAAU   1065 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis transcription factor GAMYB-like (LOC105032078), mRNA	NA	coding protein	psRNATarget
XM_010931380.2	ncRNA:20   CCUCGAGGGAAGUUAGGUUC   1   *|||||||||||||*||||* targets:927   CGAGCUCCCUUCAAGCCAAA   946 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis formin-like protein 5 (LOC105051089), mRNA	NA	coding protein	psRNATarget
XM_010925565.2	ncRNA:20   CCUCGAGGGAAGUUAGGUUC   1   *|||||||||||||*||||* targets:1040   UGAGCUCCCUUCAAGCCAAA   1059 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis transcription factor MYB44-like (LOC105046829), mRNA	NA	coding protein	psRNATarget
XM_019847089.1	ncRNA:20   CCUCGAGGGAAGUUAGGUUC   1   **|*|||||||||||||||* targets:301   UAAACUCCCUUCAAUCCAAA   320 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis leucine-rich repeat receptor protein kinase MSP1 (LOC105034761), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010910029.2	ncRNA:20   CCUCGAGGGAAGUUAGGUUC   1   **|*|||||||||||||||* targets:299   UAAACUCCCUUCAAUCCAAA   318 Target Full Sequence	3.0	PREDICTED: Elaeis guineensis leucine-rich repeat receptor protein kinase MSP1 (LOC105034761), transcript variant X1, mRNA	NA	coding protein	psRNATarget