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BaseInfo

ncRNA ID	novel_egu_miR875
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr9:6220861-6220950 [+]
Reference genome	EG5
Source	SRR3042548
Length	24
Mature sequence(if miRNA)	1 - AUAUAUGACUUUCUGUAUCUUUAU - 24
Stem-loop(if miRNA)	---A             G   -           AUC      AUUA     UAUAUGACUUUCU UAU CUUUAUAUGAU   CUGUUG    U     ||||||||||||| ||| |||||||||||   ||||||    U     AUAUACUGAAGGA AUA GGAAUAUACUG   GAUAAC    A UAUA             -   C           AAA      CAAU
Stem-loop sequence	AUAUAUGACUUUCUGUAUCUUUAUAUGAUAUCCUGUUGAUUAUUAUAACCAAUAGAAAGUCAUAUAAGGCAUAAGGAAGUCAUAUAAUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019849543.1	ncRNA:24   UAUUUCUAUGUCUUUCAGUAUAUA   1   |||*||||*||||||||||||*|| targets:2563   AUAUAGAUCCAGAAAGUCAUAAAU   2586 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis DNA mismatch repair protein MSH2 (LOC105041044), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010917838.1	ncRNA:24   UAUUUCUAUGUCUUUCAGUAUAUA   1   |||*||||*||||||||||||*|| targets:2608   AUAUAGAUCCAGAAAGUCAUAAAU   2631 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis DNA mismatch repair protein MSH2 (LOC105041044), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010917837.1	ncRNA:24   UAUUUCUAUGUCUUUCAGUAUAUA   1   |||*||||*||||||||||||*|| targets:2674   AUAUAGAUCCAGAAAGUCAUAAAU   2697 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis DNA mismatch repair protein MSH2 (LOC105041044), transcript variant X1, mRNA	NA	coding protein	psRNATarget