ncRNA ID | novel_egu_miR867 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr9:12144372-12144488 [+] |
Reference genome | EG5 |
Source | SRR3042548 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGUAGGAGCUUAGAGAGUGGAUG - 24 |
Stem-loop(if miRNA) |
--         CU     -      U  A    C    UUAGC    AA    -U    AU   AAGUAGGAG  UAGAG AGUGGA GU GAUA AAGG     AUCG  CCAC  AUAA  A   |||||||||  ||||| |||||| || |||| ||||     ||||  ||||  ||||   UUCAUUCUC  AUUUC UUAUUU CA CUAU UUCU     UAGU  GGUG  UGUU  U AA         UU     G      -  -    -    UCUAU    GC    UU    CC |
Stem-loop sequence | AAGUAGGAGCUUAGAGAGUGGAUGUAGAUACAAGGUUAGCAUCGAACCACUAUAAAUAUCCUUGUUUGUGGCGUGAUUAUCUUCUUUAUCACUUUAUUGCUUUAUUCUCUUACUUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01038860.1 |
|
2.5 | TSA: Elaeis guineensis Unigene20697_All transcribed RNA sequence | NA | coding protein | psRNATarget |