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BaseInfo

ncRNA ID novel_egu_miR867
Species Elaeis guineensis
Class miRNA
Genome position Chr9:12144372-12144488 [+]
Reference genome EG5
Source SRR3042548
Length 24
Mature sequence(if miRNA) 1 - AAGUAGGAGCUUAGAGAGUGGAUG - 24
Stem-loop(if miRNA) --         CU     -      U  A    C    UUAGC    AA    -U    AU
  AAGUAGGAG  UAGAG AGUGGA GU GAUA AAGG     AUCG  CCAC  AUAA  A
  |||||||||  ||||| |||||| || |||| ||||     ||||  ||||  ||||
  UUCAUUCUC  AUUUC UUAUUU CA CUAU UUCU     UAGU  GGUG  UGUU  U
AA         UU     G      -  -    -    UCUAU    GC    UU    CC
Stem-loop sequence AAGUAGGAGCUUAGAGAGUGGAUGUAGAUACAAGGUUAGCAUCGAACCACUAUAAAUAUCCUUGUUUGUGGCGUGAUUAUCUUCUUUAUCACUUUAUUGCUUUAUUCUCUUACUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01038860.1
ncRNA:24   GUAGGUGAGAGAUUCGAGGAUGAA   1
  |||||||||*|*||||||||||||
targets:141   CAUCCACUCCCCAAGCUCCUACUU   164

2.5 TSA: Elaeis guineensis Unigene20697_All transcribed RNA sequence NA coding protein psRNATarget