ncRNA ID | novel_egu_miR863 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr10:1291840-1292037 [-] |
Reference genome | EG5 |
Source | SRR3042542 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAAGUCAUAAUUUGAUCGUAGGAU - 24 |
Stem-loop(if miRNA) |
--     A               C          AA  AU    A   UC     -UAA       -A   A  AA A      UA     -       U   CCUGC GUCAAAUUAUGACUU CUGCACAGUA  AA  CAUA UUU  UUACA    GUUAUAA  GAG GA  G UAUUUU  UCGUU GAAAAUU A   ||||| ||||||||||||||| ||||||||||  ||  |||| |||  |||||    |||||||  ||| ||  | ||||||  ||||| ||||||| U   GGAUG UAGUUUAAUACUGAA GAUGUGUUGU  UU  GUAU GAA  GGUGU    CAGUAUU  UUC CU  C GUAAAA  AGUAA UUUUUAA A UA     C               A          CA  CG    C   UC     UCUA       CC   C  CC C      GC     A       A |
Stem-loop sequence | CCUGCAGUCAAAUUAUGACUUCCUGCACAGUAAAAAAUCAUAAUUUUCUUACAUAAGUUAUAAAGAGAGAAAGAUAUUUUUAUCGUUGAAAAUUUAUAAAAUUUUUAAAUGACGAAAAUGCCCCUCCCUUCCUUAUGACAUCUUGUGGCUAAGCUAUGGCUUACUGUUGUGUAGAAAGUCAUAAUUUGAUCGUAGGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010916187.1 |
|
1.0 | PREDICTED: Elaeis guineensis subtilisin-like protease SBT1.5 (LOC105039875), mRNA | NA | coding protein | psRNATarget |