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BaseInfo

ncRNA ID novel_egu_miR860
Species Elaeis guineensis
Class miRNA
Genome position Chr7:37783650-37783752 [+]
Reference genome EG5
Source SRR3042548
Length 24
Mature sequence(if miRNA) 1 - AGAAACUGGAGAGAGAAGGUAGAG - 24
Stem-loop(if miRNA)      CU -                 -----------------------            A
AGAAA  G GAGAGAGAAGGUAGAGA                       GAGGAGAGAGAA A
|||||  | |||||||||||||||||                       |||||||||||| U
UCUUU  C CUUUCUCUUUUAUUUUU                       UUCUUCUCUCUU U
     UU U                 UUUAUUUUAUUUUAUUUUUCUUC            U
Stem-loop sequence AGAAACUGGAGAGAGAAGGUAGAGAGAGGAGAGAGAAAAUUUUUCUCUCUUCUUCUUCUUUUUAUUUUAUUUUAUUUUUUUUAUUUUCUCUUUCUCUUUUUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019854012.1
ncRNA:24   GAGAUGGAAGAGAGAGGUCAAAGA   1
  *||**|||||||||||=||||||*
targets:2251   GUCAUCCUUCUCUCUCUAGUUUCC   2274

2.5 PREDICTED: Elaeis guineensis uncharacterized LOC105055185 (LOC105055185), mRNA NA coding protein psRNATarget