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BaseInfo

ncRNA ID novel_egu_miR859
Species Elaeis guineensis
Class miRNA
Genome position Chr11:2872611-2872682 [+]
Reference genome EG5
Source SRR3042542
Length 21
Mature sequence(if miRNA) 52 - GCUGGAGAUGGGCUAAGGCUA - 72
Stem-loop(if miRNA) --    -    G C   G   AUAGAU   AA     
  GUCU AGCC C UCU UAG      UGA  ACAUCU
  |||| |||| | ||| |||      |||  |||||A
  CGGA UCGG G AGA GUC      ACU  UGUAGU
AU    A    - U   G   -GACGU   CC     
Stem-loop sequence GUCUAGCCGCCUCUGUAGAUAGAUUGAAAACAUCUAUGAUGUCCUCAUGCAGCUGGAGAUGGGCUAAGGCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01043728.1
ncRNA:21   AUCGGAAUCGGGUAGAGGUCG   1
  *|*||||=||||||||||||*
targets:103   GAUCCUUGGCCCAUCUCCAGG   123

3.0 TSA: Elaeis guineensis Unigene25569_All transcribed RNA sequence NA coding protein psRNATarget