ncRNA ID | novel_egu_miR857 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr6:18738779-18738982 [-] |
Reference genome | EG5 |
Source | SRR3042548 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAAUUUGAUUGUAGGAUGUCAUA - 24 |
Stem-loop(if miRNA) |
--      G                          CUA  A          -ACCCA     U          A     A        CAUCAU       CUC   UGAUAU CUGUAAUCAAAUUAUGACUUCUUGCA   GA GUCAUAAUUU      CAGGA GUCAUAAAAA GGAAA GAUAUUUU      UUAAAAA   A   |||||| ||||||||||||||||||||||||||   || ||||||||||      ||||| |||||||||| ||||| ||||||||      |||||||   ACUGUA GAUGUUAGUUUAAUACUGAAGGAUGU   CU CAGUAUUAAA      GUCUU CAGUAUUUUU CCUUU CUAUAAAA      AAUUUUU   U AU      G                          AUC  A          AAGAAG     -          -     A        -ACAAU       AAA |
Stem-loop sequence | UGAUAUGCUGUAAUCAAAUUAUGACUUCUUGCACUAGAAGUCAUAAUUUACCCACAGGAUGUCAUAAAAAAGGAAAAGAUAUUUUCAUCAUUUAAAAACUCAUAAAUUUUUAAUAACAAAAAUAUCAUUUCCUUUUUAUGACUUCUGGAAGAAAAAUUAUGACAUCCUAUGUAGGAAGUCAUAAUUUGAUUGUAGGAUGUCAUA |