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BaseInfo

ncRNA ID novel_egu_miR857
Species Elaeis guineensis
Class miRNA
Genome position Chr6:18738779-18738982 [-]
Reference genome EG5
Source SRR3042548
Length 24
Mature sequence(if miRNA) 1 - AUAAUUUGAUUGUAGGAUGUCAUA - 24
Stem-loop(if miRNA) --      G                          CUA  A          -ACCCA     U          A     A        CAUCAU       CUC
  UGAUAU CUGUAAUCAAAUUAUGACUUCUUGCA   GA GUCAUAAUUU      CAGGA GUCAUAAAAA GGAAA GAUAUUUU      UUAAAAA   A
  |||||| ||||||||||||||||||||||||||   || ||||||||||      ||||| |||||||||| ||||| ||||||||      |||||||
  ACUGUA GAUGUUAGUUUAAUACUGAAGGAUGU   CU CAGUAUUAAA      GUCUU CAGUAUUUUU CCUUU CUAUAAAA      AAUUUUU   U
AU      G                          AUC  A          AAGAAG     -          -     A        -ACAAU       AAA
Stem-loop sequence UGAUAUGCUGUAAUCAAAUUAUGACUUCUUGCACUAGAAGUCAUAAUUUACCCACAGGAUGUCAUAAAAAAGGAAAAGAUAUUUUCAUCAUUUAAAAACUCAUAAAUUUUUAAUAACAAAAAUAUCAUUUCCUUUUUAUGACUUCUGGAAGAAAAAUUAUGACAUCCUAUGUAGGAAGUCAUAAUUUGAUUGUAGGAUGUCAUA