Search result

BaseInfo

ncRNA ID novel_egu_miR851
Species Elaeis guineensis
Class miRNA
Genome position Chr6:31001917-31002058 [+]
Reference genome EG5
Source SRR3042548
Length 24
Mature sequence(if miRNA) 1 - UUCGAAUGAUAUGCGGAGGGUUCG - 24
Stem-loop(if miRNA) --U            -C      UU     A      CG    A        --        C  A     UUU
   UCGAAUGAUAUG  GGAGGG  CGAGA AAAUUU  GAUA UAUUUUUU  UAGUUCUC UC CACAU   G
   ||||||||||||  ||||||  ||||| ||||||  |||| ||||||||  |||||||| || |||||
   AGUUUACUAUAC  UUUUCC  GCUUU UUUAAA  CUGU AUAAAAAG  AUCAAGAG AG GUGUA   A
AUU            AU      UG     C      -A    C        GA        -  -     CUG
Stem-loop sequence UUCGAAUGAUAUGCGGAGGGUUCGAGAAAAAUUUCGGAUAAUAUUUUUUUAGUUCUCCUCACACAUUUUGAGUCAUGUGGAGAGAACUAAGGAAAAAUACUGUCAAAAUUUCUUUCGGUCCUUUUUACAUAUCAUUUGAUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010913907.2
ncRNA:24   GCUU---GGGAGGCGUAUAGUAAGCUU   1
  =|==---|||||*|||||||||||||=
targets:1837   UGGGUGCCCCUCAGCAUAUCAUUCGAG   1863

2.0 PREDICTED: Elaeis guineensis DDT domain-containing protein PTM (LOC105038189), transcript variant X1, mRNA NA coding protein psRNATarget