ncRNA ID | novel_egu_miR851 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr6:31001917-31002058 [+] |
Reference genome | EG5 |
Source | SRR3042548 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUCGAAUGAUAUGCGGAGGGUUCG - 24 |
Stem-loop(if miRNA) |
--U            -C      UU     A      CG    A        --        C  A     UUU    UCGAAUGAUAUG  GGAGGG  CGAGA AAAUUU  GAUA UAUUUUUU  UAGUUCUC UC CACAU   G    ||||||||||||  ||||||  ||||| ||||||  |||| ||||||||  |||||||| || |||||    AGUUUACUAUAC  UUUUCC  GCUUU UUUAAA  CUGU AUAAAAAG  AUCAAGAG AG GUGUA   A AUU            AU      UG     C      -A    C        GA        -  -     CUG |
Stem-loop sequence | UUCGAAUGAUAUGCGGAGGGUUCGAGAAAAAUUUCGGAUAAUAUUUUUUUAGUUCUCCUCACACAUUUUGAGUCAUGUGGAGAGAACUAAGGAAAAAUACUGUCAAAAUUUCUUUCGGUCCUUUUUACAUAUCAUUUGAUUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010913907.2 |
|
2.0 | PREDICTED: Elaeis guineensis DDT domain-containing protein PTM (LOC105038189), transcript variant X1, mRNA | NA | coding protein | psRNATarget |