ncRNA ID | novel_egu_miR848 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr6:10796405-10796550 [-] |
Reference genome | EG5 |
Source | SRR3042548 |
Length | 24 |
Mature sequence(if miRNA) | 123 - AGAAACUGGAGAGAGAAGGUAGAG - 146 |
Stem-loop(if miRNA) |
     --CU            ---U         -------------------------            UUUUUCUCUCUUCUUC AGAAA    GGAGAGAGAAGG    AGAGAGAGA                         AGAAAGAGAAAA                U |||||    ||||||||||||    |||||||||                         |||||||||||| UCUUU    UUUCUUUUUUCC    UCUUUUUCU                         UCUUUCUCUUUU                U      UUCU            UUUU         UUUCUUUUUCCUUUUUUAUUUUUUC            UAUUUUUAUUUUUUUU |
Stem-loop sequence | AGAAACUGGAGAGAGAAGGUAGAGAGAGAAGAAAGAGAAAAUUUUUCUCUCUUCUUCUUUUUUUUUUAUUUUUAUUUUUCUCUUUCUCUUUUUUAUUUUUUCCUUUUUCUUUUCUUUUUCUUUUUCCUUUUUUCUUUUCUUUUUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019854012.1 |
|
2.5 | PREDICTED: Elaeis guineensis uncharacterized LOC105055185 (LOC105055185), mRNA | NA | coding protein | psRNATarget |