ncRNA ID | novel_egu_miR847 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr6:7601859-7601922 [+] |
Reference genome | EG5 |
Source | SRR3042548 |
Length | 24 |
Mature sequence(if miRNA) | 41 - AGAUUUGGUUUGGGCUUGAUUGGA - 64 |
Stem-loop(if miRNA) |
--    -     G                      CAAU GGGCU AGAUUAAGUCUAAUUGAAUA   |||| ||||| |||||||||||||||||||U   GUUA UUCGG UUUGGUUUAGAUUAAUUUAA AG    G     G                    |
Stem-loop sequence | CAAUGGGCUGAGAUUAAGUCUAAUUGAAUAUAAUUUAAUUAGAUUUGGUUUGGGCUUGAUUGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
JO089280.1 |
|
3.0 | TSA: Elaeis guineensis isotig02028.Elguifruit mRNA sequence | NA | coding protein | psRNATarget | |||||||||
JO089279.1 |
|
3.0 | TSA: Elaeis guineensis isotig02027.Elguifruit mRNA sequence | NA | coding protein | psRNATarget |