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BaseInfo

ncRNA ID novel_egu_miR844
Species Elaeis guineensis
Class miRNA
Genome position Chr5:34060-34159 [+]
Reference genome EG5
Source SRR3042548
Length 21
Mature sequence(if miRNA) 1 - UAUGGGGCGGGCACUAUAAAA - 21
Stem-loop(if miRNA) --          G                         G       A  U
  UAUGGGGCGG CACUAUAAAAUAUCAUAUGGGGCGG CUUCAUA UG G
  |||||||||| ||||||||||||||||||||||||| ||||||| || G
  AUACCCCGCC GUGAUAUUUUAUAGUAUACCUUGCC GAAGUGU AC C
GU          -                         G       C  A
Stem-loop sequence UAUGGGGCGGGCACUAUAAAAUAUCAUAUGGGGCGGGCUUCAUAAUGUGGCACACUGUGAAGGCCGUUCCAUAUGAUAUUUUAUAGUGCCGCCCCAUAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01007937.1
ncRNA:21   AAAAUAUCACGGGCGGGGUAU   1
  ||||=||||||||||||||||
targets:472   UUUUGUAGUGCCCGCCCCAUA   492

1.0 TSA: Elaeis guineensis CL2739.Contig1_All transcribed RNA sequence NA coding protein psRNATarget