ncRNA ID | novel_egu_miR844 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr5:34060-34159 [+] |
Reference genome | EG5 |
Source | SRR3042548 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UAUGGGGCGGGCACUAUAAAA - 21 |
Stem-loop(if miRNA) |
--          G                         G       A  U   UAUGGGGCGG CACUAUAAAAUAUCAUAUGGGGCGG CUUCAUA UG G   |||||||||| ||||||||||||||||||||||||| ||||||| || G   AUACCCCGCC GUGAUAUUUUAUAGUAUACCUUGCC GAAGUGU AC C GU          -                         G       C  A |
Stem-loop sequence | UAUGGGGCGGGCACUAUAAAAUAUCAUAUGGGGCGGGCUUCAUAAUGUGGCACACUGUGAAGGCCGUUCCAUAUGAUAUUUUAUAGUGCCGCCCCAUAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01007937.1 |
|
1.0 | TSA: Elaeis guineensis CL2739.Contig1_All transcribed RNA sequence | NA | coding protein | psRNATarget |