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BaseInfo

ncRNA ID novel_egu_miR843
Species Elaeis guineensis
Class miRNA
Genome position Chr5:34147326-34147404 [+]
Reference genome EG5
Source SRR3042548
Length 21
Mature sequence(if miRNA) 1 - UUCCAAACUGAAGAUAGCAUA - 21
Stem-loop(if miRNA) --               A   U        G   AG  A
  UUCCAAACUGAAGAU GCA ACUGUUUG UGA  UC G
  ||||||||||||||| ||| |||||||| |||  || C
  AAGGUUUGACUUCUA CGU UGACAAAC GUU  AG G
UU               C   U        G   GA  U
Stem-loop sequence UUCCAAACUGAAGAUAGCAUACUGUUUGGUGAAGUCAGCGUGAAGUUGGCAAACAGUUUGCCAUCUUCAGUUUGGAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01050964.1
ncRNA:21   AUACGAUAGAAGUCAAACCUU   1
  *||||*|||||||*|||||||
targets:111   CAUGCCAUCUUCAUUUUGGAA   131

2.5 TSA: Elaeis guineensis Unigene32806_All transcribed RNA sequence NA coding protein psRNATarget