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BaseInfo

ncRNA ID	ath-miRf10933-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - AGAGUUUCCUCAAAAAUAGAGGA - NA
Stem-loop(if miRNA)	AAA       G              AAUUGUAGAGA      U UCUAAAAUAGAGUUUCCUC   AAUAGAG AAAAAAUAGAGAUG           UCUCUA U |||||||||||||||||||   ||||||| ||||||||||||||           |||||| AGAUUUUAUCUCAAAGGAG   UUAUCUC UUUUUUAUCUCUAU           AGAGAU U                    AUA       -              AAAUGAAAAAC      A
Stem-loop sequence	UCUAAAAUAGAGUUUCCUCAAAAAUAGAGGAAAAAAUAGAGAUGAAUUGUAGAGAUCUCUAUUUAUAGAGACAAAAAGUAAAUAUCUCUAUUUUUUCUCUAUUAUAGAGGAAACUCUAUUUUAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_120602.5	ncRNA:23   AGGAGAUAAAAACUCCUUUGAGA   1   ||||||||*|||||||||||||| targets:500   UCCUCUAUAUUUGAGGAAACUCU   522 Target Full Sequence	1.0	Arabidopsis thaliana Protein kinase superfamily protein mRNA	Protein kinase superfamily protein(AT5G05200)	coding protein	psRNATarget
AY035149.1	ncRNA:23   AGGAGAUAAAAACUCCUUUGAGA   1   ||||||||*|||||||||||||| targets:395   UCCUCUAUAUUUGAGGAAACUCU   417 Target Full Sequence	1.0	Arabidopsis thaliana unknown protein (At5g05200) mRNA, complete cds	NA	coding protein	psRNATarget
AY059866.1	ncRNA:23   AGGAGAUAAAAACUCCUUUGAGA   1   ||||||||*|||||||||||||| targets:426   UCCUCUAUAUUUGAGGAAACUCU   448 Target Full Sequence	1.0	Arabidopsis thaliana Unknown protein (K2A11.7) mRNA, complete cds	NA	coding protein	psRNATarget
AF361613.1	ncRNA:23   AGGAGAUAAAAACUCCUUUGAGA   1   ||||||||*|||||||||||||| targets:428   UCCUCUAUAUUUGAGGAAACUCU   450 Target Full Sequence	1.0	Arabidopsis thaliana AT5g05200/K2A11_7 mRNA, complete cds	NA	coding protein	psRNATarget
AY093317.1	ncRNA:23   AGGAGAUAAAAACUCCUUUGAGA   1   ||||||||*|||||||||||||| targets:375   UCCUCUAUAUUUGAGGAAACUCU   397 Target Full Sequence	1.0	Arabidopsis thaliana unknown protein (K2A11.7) mRNA, complete cds	NA	coding protein	psRNATarget
BX831944.1	ncRNA:23   AGGAGAUAAAAACUCCUUUGAGA   1   ||||||||*|||||||||||||| targets:376   UCCUCUAUAUUUGAGGAAACUCU   398 Target Full Sequence	1.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH40ZG10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY063020.1	ncRNA:23   AGGAGAUAAAAACUCCUUUGAGA   1   ||||||||*|||||||||||||| targets:375   UCCUCUAUAUUUGAGGAAACUCU   397 Target Full Sequence	1.0	Arabidopsis thaliana unknown protein (At5g05200) mRNA, complete cds	NA	coding protein	psRNATarget
AY133554.1	ncRNA:23   AGGAGAUAAAAACUCCUUUGAGA   1   ||||||||*|||||||||||||| targets:375   UCCUCUAUAUUUGAGGAAACUCU   397 Target Full Sequence	1.0	Arabidopsis thaliana At5g05200/K2A11_7 mRNA, complete cds	NA	coding protein	psRNATarget