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BaseInfo

ncRNA ID novel_egu_miR840
Species Elaeis guineensis
Class miRNA
Genome position Chr10:4288196-4288265 [+]
Reference genome EG5
Source SRR3042542
Length 24
Mature sequence(if miRNA) 47 - AAGGAGAUCUGAUAGAGUACCGCA - 70
Stem-loop(if miRNA) --U  -    G        AAA      AUC    A
   GG ACUU AUUAGAUU   UUUGAA   UGUU U
   || |||| ||||||||   ||||||   |||| A
   CC UGAG UAGUCUAG   GAAUUU   AUAA G
ACG  A    A        -AG      -CU    A
Stem-loop sequence UGGACUUGAUUAGAUUAAAUUUGAAAUCUGUUAUAGAAAUAUCUUUAAGGAGAUCUGAUAGAGUACCGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010933165.2
ncRNA:24   ACGCCAUGAGAUAGUCUAGAGGAA   1
  **||||||*||||||||||||*||
targets:299   CACGGUACACUAUCAGAUCUCGUU   322

2.5 PREDICTED: Elaeis guineensis uncharacterized LOC105052377 (LOC105052377), mRNA NA coding protein psRNATarget