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BaseInfo

ncRNA ID novel_egu_miR838
Species Elaeis guineensis
Class miRNA
Genome position Chr4:43822537-43822642 [-]
Reference genome EG5
Source SRR3042548;SRR5189964
Length 24
Mature sequence(if miRNA) 83 - UGACAUCCUGUGGCAUAUUAUGAU - 106
Stem-loop(if miRNA) --             CA            C  AA   U     C  AUC   C
  UGACAUCCUGUGG  UAUUAUGAUAUU UG  UCA AUUAU AC   CUG A
  |||||||||||||  |||||||||||| ||  ||| ||||| ||   |||
  ACUGUAGGAUACU  AUAAUACUAUAG AU  AGU UAAUA UG   GAU U
AU             AC            U  AC   U     C  AAA   A
Stem-loop sequence UGACAUCCUGUGGCAUAUUAUGAUAUUCUGAAUCAUAUUAUCACAUCCUGCAUAUAGAAAGUCAUAAUUUGACAUAUGAUAUCAUAAUACAUCAUAGGAUGUCAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019851713.1
ncRNA:24   UAGUAUUAUACGGUGUCCUACAGU   1
  =||*|||||||||||*|||||||*
targets:1696   GUCCUAAUAUGCCACUGGAUGUCU   1719

2.5 PREDICTED: Elaeis guineensis uncharacterized LOC105048955 (LOC105048955), mRNA NA coding protein psRNATarget