ncRNA ID | novel_egu_miR829 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr3:56606697-56606792 [-] |
Reference genome | EG5 |
Source | SRR3042548 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUGUUUCGAUUGGGAGGAGGGCAG - 24 |
Stem-loop(if miRNA) |
--        UU           U         C    CUGAGAG   GC   GCCCUCCU  CGAUCGAAACA GGUUCCUGG UUCA       UUA  A   ||||||||  ||||||||||| ||||||||| ||||       |||   CGGGAGGA  GUUAGCUUUGU CCGGGGAUU AAGU       AAU  A GA        GG           U         -    ---AAAA   AA |
Stem-loop sequence | GCCCUCCUUUCGAUCGAAACAUGGUUCCUGGCUUCACUGAGAGUUAGCAAAAUAAAAAAUGAAUUAGGGGCCUUGUUUCGAUUGGGAGGAGGGCAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010918613.2 |
|
2.5 | PREDICTED: Elaeis guineensis acetyl-CoA carboxylase 1 (LOC105041644), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_019849316.1 |
|
2.5 | PREDICTED: Elaeis guineensis acetyl-CoA carboxylase 1 (LOC105041644), transcript variant X2, mRNA | NA | coding protein | psRNATarget |