Search result

BaseInfo

ncRNA ID	novel_egu_miR828
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr1:65408168-65408231 [-]
Reference genome	EG5
Source	SRR3042542
Length	24
Mature sequence(if miRNA)	1 - AUGUAUCCAGAGAACAUGAUCGAA - 24
Stem-loop(if miRNA)	--   -   A      CA      CA     UA   CGA CGU GUUCUC  GAUACA  AGUAU  A   ||| ||| ||||||  ||||||  |||||  A   GCU GUA CAAGAG  CUAUGU  UCGUG  G AA   A   -      AC      -A     UU
Stem-loop sequence	CGACGUAGUUCUCCAGAUACACAAGUAUUAAAGUUGUGCUAUGUAUCCAGAGAACAUGAUCGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JO098537.1	ncRNA:24   AA--GC---UAGUACAAGAGACCUAUGUA   1   ||--||---|||||*|||||||||||||| targets:511   UUGGCGGCAAUCAUUUUCUCUGGAUACAU   539 Target Full Sequence	1.0	TSA: Elaeis guineensis isotig11310.Elguifruit mRNA sequence	NA	coding protein	psRNATarget
NM_001319911.1	ncRNA:24   AA--GC---UAGUACAAGAGACCUAUGUA   1   ||--||---|||||*|||||||||||||| targets:622   UUGGCGGCAAUCAUUUUCUCUGGAUACAU   650 Target Full Sequence	1.0	Elaeis guineensis BI1-like protein (LOC105046588), mRNA	NA	coding protein	psRNATarget
JN203307.1	ncRNA:24   AA--GC---UAGUACAAGAGACCUAUGUA   1   ||--||---|||||*|||||||||||||| targets:622   UUGGCGGCAAUCAUUUUCUCUGGAUACAU   650 Target Full Sequence	1.0	Elaeis guineensis putative transmembrane BAX inhibitor motif-containing protein mRNA, complete cds	NA	coding protein	psRNATarget