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BaseInfo

ncRNA ID novel_egu_miR823
Species Elaeis guineensis
Class miRNA
Genome position Chr3:13414795-13414993 [-]
Reference genome EG5
Source SRR3042548
Length 24
Mature sequence(if miRNA) 1 - AUAAUUUCAACGUAGGAUGCCAUA - 24
Stem-loop(if miRNA) --  A                         C      G                             A    AG    - A      CA        UGA
  UG CAUCUUGCGUUGAAAUUAUGACUUU UGCAUA GAUAUCAUAAUUUUUUUACAGGAUGUCAU AAGA  GAAG G CGUUUU  UCAUUGAA   A
  || ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||  |||| | ||||||  ||||||||   A
  AC GUAGGAUGCAACUUUAAUACUGAAA ACGUGU CUAUAGUAUUAAAAAAGUGUUUUAUAGUA UUCU  CUUC C GUAAAA  AGUAAUUU   A
AU  C                         C      A                             A    CU    G -      AC        UUU
Stem-loop sequence UGACAUCUUGCGUUGAAAUUAUGACUUUCUGCAUAGGAUAUCAUAAUUUUUUUACAGGAUGUCAUAAAGAAGGAAGGACGUUUUCAUCAUUGAAUGAAAAUUUUUUAAUGACAAAAAUGCGCUUCUCUCUUAAUGAUAUUUUGUGAAAAAAUUAUGAUAUCAUGUGCACAAAGUCAUAAUUUCAACGUAGGAUGCCAUA