ncRNA ID | novel_egu_miR820 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr2:6846941-6847145 [+] |
Reference genome | EG5 |
Source | SRR3042548 |
Length | 21 |
Mature sequence(if miRNA) | 185 - UUUGAGAUAGUAGAUCACAUC - 205 |
Stem-loop(if miRNA) |
--     G      CG      C                 -      A               A UC  G         A       A  U  UUAA     UU   UGUGA CUACUA  UCAAAA UGUUUGCACACAAAAAA UCAUAU AUUUGAAGACCUCUA C  AU CAUCAAGUG UUAAAAA UA AU    CUUAA  U   ||||| ||||||  |||||| ||||||||||||||||| |||||| ||||||||||||||| |  || ||||||||| ||||||| || ||    |||||   ACACU GAUGAU  AGUUUU ACGAACGUGUGUUUUUU AGUAUA UAAACUUUUGGGGAU G  UA GUAGUUUAU AAUUUUU AU UG    GGAUU  U CU     A      AG      A                 U      C               C GA  A         C       A  U  --UC     UA |
Stem-loop sequence | UGUGAGCUACUACGUCAAAACUGUUUGCACACAAAAAAUCAUAUAAUUUGAAGACCUCUAACUCAUGCAUCAAGUGAUUAAAAAAUAUAUUUAACUUAAUUUUAUUUAGGCUGUUUAAUUUUUAACUAUUUGAUGAAUAGGCUAGGGGUUUUCAAAUCAUAUGAUUUUUUUGUGUGCAAGCAAUUUUGAGAUAGUAGAUCACAUC |