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BaseInfo

ncRNA ID novel_egu_miR820
Species Elaeis guineensis
Class miRNA
Genome position Chr2:6846941-6847145 [+]
Reference genome EG5
Source SRR3042548
Length 21
Mature sequence(if miRNA) 185 - UUUGAGAUAGUAGAUCACAUC - 205
Stem-loop(if miRNA) --     G      CG      C                 -      A               A UC  G         A       A  U  UUAA     UU
  UGUGA CUACUA  UCAAAA UGUUUGCACACAAAAAA UCAUAU AUUUGAAGACCUCUA C  AU CAUCAAGUG UUAAAAA UA AU    CUUAA  U
  ||||| ||||||  |||||| ||||||||||||||||| |||||| ||||||||||||||| |  || ||||||||| ||||||| || ||    |||||
  ACACU GAUGAU  AGUUUU ACGAACGUGUGUUUUUU AGUAUA UAAACUUUUGGGGAU G  UA GUAGUUUAU AAUUUUU AU UG    GGAUU  U
CU     A      AG      A                 U      C               C GA  A         C       A  U  --UC     UA
Stem-loop sequence UGUGAGCUACUACGUCAAAACUGUUUGCACACAAAAAAUCAUAUAAUUUGAAGACCUCUAACUCAUGCAUCAAGUGAUUAAAAAAUAUAUUUAACUUAAUUUUAUUUAGGCUGUUUAAUUUUUAACUAUUUGAUGAAUAGGCUAGGGGUUUUCAAAUCAUAUGAUUUUUUUGUGUGCAAGCAAUUUUGAGAUAGUAGAUCACAUC