Search result

BaseInfo

ncRNA ID	novel_egu_miR818
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr11:20141431-20141521 [+]
Reference genome	EG5
Source	SRR3042542
Length	24
Mature sequence(if miRNA)	1 - AAAUUGAAAGUAGAGGCUACCAAU - 24
Stem-loop(if miRNA)	---A         U      U  --C     AACUAAAAUAGUGAGNN     AAUUGAAAG AGAGGC AC   AAUUC                 N     ||||||||| |||||| ||   |||||     UUGACUUUC UUUUUG UG   UUGAG                 N AGUA         -      -  UUC     ANNNNNNNNNNNNNNNN
Stem-loop sequence	AAAUUGAAAGUAGAGGCUACCAAUUCAACUAAAAUAGUGAGNNNNNNNNNNNNNNNNNNNNAGAGUUCUUGUGUUUUUCUUUCAGUUAUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019848477.1	ncRNA:24   UAACCAUCGGAGAUGAAAGUUAAA   1   ******||=||||||||||||||| targets:1457   CCACUAAGUCUCUACUUUCAAUUU   1480 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis uncharacterized LOC105039090 (LOC105039090), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_010915090.2	ncRNA:24   UAACCAUCGGAGAUGAAAGUUAAA   1   ******||=||||||||||||||| targets:1966   CCACUAAGUCUCUACUUUCAAUUU   1989 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis uncharacterized LOC105039090 (LOC105039090), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_010915089.2	ncRNA:24   UAACCAUCGGAGAUGAAAGUUAAA   1   ******||=||||||||||||||| targets:1966   CCACUAAGUCUCUACUUUCAAUUU   1989 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis uncharacterized LOC105039090 (LOC105039090), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010915088.2	ncRNA:24   UAACCAUCGGAGAUGAAAGUUAAA   1   ******||=||||||||||||||| targets:1966   CCACUAAGUCUCUACUUUCAAUUU   1989 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis uncharacterized LOC105039090 (LOC105039090), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_019848476.1	ncRNA:24   UAACCAUCGGAGAUGAAAGUUAAA   1   ******||=||||||||||||||| targets:1978   CCACUAAGUCUCUACUUUCAAUUU   2001 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis uncharacterized LOC105039090 (LOC105039090), transcript variant X2, mRNA	NA	coding protein	psRNATarget