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BaseInfo

ncRNA ID	novel_egu_miR816
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr2:4384499-4384650 [+]
Reference genome	EG5
Source	SRR3042548
Length	24
Mature sequence(if miRNA)	129 - AGCAAGACUGAAGAUAGAGAAGAC - 152
Stem-loop(if miRNA)	UUAUU       --     -U     --  AUGCGCGGUAUUGAAAAGAUCUUGAGAGGUGGUGUCCUGGCCAGACAUC      UCUUCUU  UCUUC  UGCUG  CG                                                 C      |||||||  |||||  |||||  ||                                                 A      AGAAGAG  AGAAG  AGAAC  GU                                                 C ----C       AU     UC     GA  GGUAGCAACGUUAGACACAGAAUCAUGGCGGAGCGAGACUAUGGUGAAC
Stem-loop sequence	UUAUUUCUUCUUUCUUCUUGCUGCGAUGCGCGGUAUUGAAAAGAUCUUGAGAGGUGGUGUCCUGGCCAGACAUCCACCAAGUGGUAUCAGAGCGAGGCGGUACUAAGACACAGAUUGCAACGAUGGUGAGCAAGACUGAAGAUAGAGAAGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GBSV01017255.1	ncRNA:24   CAGAAGAGAUAGAAGUCAGAACGA   1   ||=|||||*||||||||||||||| targets:558   GUUUUCUCCAUCUUCAGUCUUGCU   581 Target Full Sequence	1.0	TSA: Elaeis guineensis CL6532.Contig1_All transcribed RNA sequence	NA	coding protein	psRNATarget
GBSV01017256.1	ncRNA:24   CAGAAGAGAUAGAAGUCAGAACGA   1   ||||||||*|||||||||=||||| targets:173   GUCUUCUCCAUCUUCAGUUUUGCU   196 Target Full Sequence	2.5	TSA: Elaeis guineensis CL6532.Contig2_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_019854850.1	ncRNA:24   CAGAAGAGAUAGAAGUCAGAACGA   1   *||**||=|||||||||*|||||| targets:2509   AUCACCUUUAUCUUCAGGCUUGCU   2532 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis rho GTPase-activating protein 7-like (LOC105057598), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010940245.2	ncRNA:24   CAGAAGAGAUAGAAGUCAGAACGA   1   *||**||=|||||||||*|||||| targets:2415   AUCACCUUUAUCUUCAGGCUUGCU   2438 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis rho GTPase-activating protein 7-like (LOC105057598), transcript variant X1, mRNA	NA	coding protein	psRNATarget