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BaseInfo

ncRNA ID novel_egu_miR813
Species Elaeis guineensis
Class miRNA
Genome position Chr2:2250860-2250907 [+]
Reference genome EG5
Source SRR3042548
Length 21
Mature sequence(if miRNA) 28 - UUCACGCAGUCGUGCGCCGUU - 48
Stem-loop(if miRNA) ----CG     --G    GUGACGGC
      GCACG   GCUG        G
      |||||   ||||
      CGUGC   CGCA        G
UUGCCG     UGA    CUUCUUGC
Stem-loop sequence CGGCACGGGCUGGUGACGGCGGCGUUCUUCACGCAGUCGUGCGCCGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01011795.1
ncRNA:21   UUGCCGCGUGCUGACGCACUU   1
  |||||||||||||||||||||
targets:1177   AACGGCGCACGACUGCGUGAA   1197

0.0 TSA: Elaeis guineensis CL4224.Contig2_All transcribed RNA sequence NA coding protein psRNATarget