ncRNA ID | novel_egu_miR812 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr11:8613117-8613197 [+] |
Reference genome | EG5 |
Source | SRR3042548 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUUCAAAAUGAAGUCGGCAAG - 21 |
Stem-loop(if miRNA) |
--                                   AAU   UUUCAAAAUGAAGUCGGCAAGUGGUUUGCCGACUU   U   |||||||||||||||||||||||||||||||||||   A   AAAGUUUUGCUUCAGCCGUUCACCAAACGGUUGAA   A AA                                   GUG |
Stem-loop sequence | UUUCAAAAUGAAGUCGGCAAGUGGUUUGCCGACUUAAUUAAGUGAAGUUGGCAAACCACUUGCCGACUUCGUUUUGAAAAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01011317.1 |
|
3.0 | TSA: Elaeis guineensis CL4042.Contig3_All transcribed RNA sequence | NA | coding protein | psRNATarget | |||||||||
GBSV01011316.1 |
|
3.0 | TSA: Elaeis guineensis CL4042.Contig2_All transcribed RNA sequence | NA | coding protein | psRNATarget |