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BaseInfo

ncRNA ID ath-miRf10930-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UGUCGCUGGAUUCAGCGACC - NA
Stem-loop(if miRNA) U      A A     C   A              AC      -UAAA     AAACCAGCGAAUGAUCGCUAAAA
 UCGUUU C UGUCG UGG UUCAGCGACCAAAA  AGCGAC     CGCUG                       U
 |||||| | ||||| ||| ||||||||||||||  ||||||     |||||
 AGCAAA G ACAGC ACC AAGUCGCUGGUUUU  UCGCUG     GGUCG                       U
A      C G     A   -              CA      UCAAC     CUGGCGUUAAAAACCAGCGACUU
Stem-loop sequence UUCGUUUACAUGUCGCUGGAUUCAGCGACCAAAAACAGCGACUAAACGCUGAAACCAGCGAAUGAUCGCUAAAAUUUUCAGCGACCAAAAAUUGCGGUCGCUGGCAACUGUCGCUACUUUUGGUCGCUGAACCAACGACAGGCAAACGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001202671.1
ncRNA:20   CCAGCGACUUAGGUCGCUGU   1
  *|||||||=|||||||||||
targets:84   UGUCGCUGGAUCCAGCGACA   103

1.5 Arabidopsis thaliana RING/U-box superfamily protein mRNA RING/U-box superfamily protein(AT2G25370) coding protein psRNATarget
NM_128095.2
ncRNA:20   CCAGCGACUUAGGUCGCUGU   1
  *|||||||=|||||||||||
targets:64   UGUCGCUGGAUCCAGCGACA   83

1.5 Arabidopsis thaliana RING/U-box superfamily protein partial mRNA RING/U-box superfamily protein(AT2G25370) coding protein psRNATarget
NM_121880.4
ncRNA:20   CCAGCGACUUAGGUCGCUGU   1
  |||||=|||||||||=||||
targets:1076   GGUCGUUGAAUCCAGUGACA   1095

2.5 Arabidopsis thaliana DNAJ heat shock N-terminal domain-containing protein mRNA DNAJ heat shock N-terminal domain-containing protein(AT5G18750) coding protein psRNATarget