ncRNA ID | novel_egu_miR800 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr16:2981253-2981334 [+] |
Reference genome | EG5 |
Source | SRR3042548 |
Length | 22 |
Mature sequence(if miRNA) | 61 - UGCUCCAAUAGGGUAGAAUGGU - 82 |
Stem-loop(if miRNA) |
--AU         -             GC   A      UU     UUCUACCCU UUGGAGCACUGUA  AAA ACCAUA  U     ||||||||| |||||||||||||  ||| ||||||  U     AAGAUGGGA AACCUCGUGGCAU  UUU UGGUAU  C UGGU         U             AC   A      UG |
Stem-loop sequence | AUUUCUACCCUUUGGAGCACUGUAGCAAAAACCAUAUUUUCGUUAUGGUAUUUCAUACGGUGCUCCAAUAGGGUAGAAUGGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_019846408.1 |
|
2.5 | PREDICTED: Elaeis guineensis protein farnesyltransferase subunit beta (LOC105047991), transcript variant X3, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_010927163.2 |
|
2.5 | PREDICTED: Elaeis guineensis protein farnesyltransferase subunit beta (LOC105047991), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_019846402.1 |
|
2.5 | PREDICTED: Elaeis guineensis protein farnesyltransferase subunit beta (LOC105047991), transcript variant X1, mRNA | NA | coding protein | psRNATarget |