Search result

BaseInfo

ncRNA ID	novel_egu_miR799
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr15:18399632-18399708 [+]
Reference genome	EG5
Source	SRR3042548
Length	20
Mature sequence(if miRNA)	58 - UUUGCUGGUCAUCUGUCGAU - 77
Stem-loop(if miRNA)	--U                     A   C   -     C    GAUGGAUGACCAGCAAACAAU CGU CAU GGAUA G    ||||||||||||||||||||| ||| ||| |||||    CUGUCUACUGGUCGUUUGUUA GUA GUA CCUAU A UAG                     C   C   U     A
Stem-loop sequence	UGAUGGAUGACCAGCAAACAAUACGUCCAUGGAUACGAAUAUCCUAUGCAUGCAUUGUUUGCUGGUCAUCUGUCGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JO088549.1	ncRNA:20   UAGCUGUCUACUGGUCGUUU   1   =|=|||||||*||||||||| targets:124   GUUGACAGAUCACCAGCAAA   143 Target Full Sequence	2.5	TSA: Elaeis guineensis isotig01298.Elguifruit mRNA sequence	NA	coding protein	psRNATarget
JO088551.1	ncRNA:20   UAGCUGUCUACUGGUCGUUU   1   =|=|||||||*||||||||| targets:124   GUUGACAGAUCACCAGCAAA   143 Target Full Sequence	2.5	TSA: Elaeis guineensis isotig01300.Elguifruit mRNA sequence	NA	coding protein	psRNATarget
GBSV01024399.1	ncRNA:20   UAGCUGUCUACUGGUCGUUU   1   =**|*||||||||||||||| targets:598   GCAGCCAGAUGACCAGCAAA   617 Target Full Sequence	3.0	TSA: Elaeis guineensis Unigene6228_All transcribed RNA sequence	NA	coding protein	psRNATarget