Search result

BaseInfo

ncRNA ID novel_egu_miR793
Species Elaeis guineensis
Class miRNA
Genome position Chr14:12535115-12535219 [-]
Reference genome EG5
Source SRR3042548
Length 24
Mature sequence(if miRNA) 82 - ACUGACUUGACAAGUACUUGACUG - 105
Stem-loop(if miRNA) --AC       A      C  G    C  CCAAAAAUCUU   UC     AUU  
    UGACUUG CAAGUA UU ACUG AC           CCA  ACUAA   AGA
    ||||||| |||||| || |||| ||           |||  |||||   ||A
    ACUGAAU GUUCGU AA UGAC UG           GGU  UGAUU   UCA
UGUC       -      U  G    A  ----AAAUCAU   -C     GAC  
Stem-loop sequence ACUGACUUGACAAGUACUUGACUGCACCCAAAAAUCUUCCAUCACUAAAUUAGAAACUCAGUUAGUCUGGUACUAAAGUACAGUGAAUUGCUUGUAAGUCACUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
GBSV01037626.1
ncRNA:24   GUCAGUUCAUGAACAGUUCAGUCA   1
  ****|||||=*|||||||||||||
targets:56   AUCCCAAGUGAUUGUCAAGUCAGU   79

2.0 TSA: Elaeis guineensis Unigene19462_All transcribed RNA sequence NA coding protein psRNATarget