ncRNA ID | novel_egu_miR793 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr14:12535115-12535219 [-] |
Reference genome | EG5 |
Source | SRR3042548 |
Length | 24 |
Mature sequence(if miRNA) | 82 - ACUGACUUGACAAGUACUUGACUG - 105 |
Stem-loop(if miRNA) |
--AC       A      C  G    C  CCAAAAAUCUU   UC     AUU       UGACUUG CAAGUA UU ACUG AC           CCA  ACUAA   AGA     ||||||| |||||| || |||| ||           |||  |||||   ||A     ACUGAAU GUUCGU AA UGAC UG           GGU  UGAUU   UCA UGUC       -      U  G    A  ----AAAUCAU   -C     GAC   |
Stem-loop sequence | ACUGACUUGACAAGUACUUGACUGCACCCAAAAAUCUUCCAUCACUAAAUUAGAAACUCAGUUAGUCUGGUACUAAAGUACAGUGAAUUGCUUGUAAGUCACUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01037626.1 |
|
2.0 | TSA: Elaeis guineensis Unigene19462_All transcribed RNA sequence | NA | coding protein | psRNATarget |