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BaseInfo

ncRNA ID	novel_egu_miR787
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr13:5840780-5840990 [+]
Reference genome	EG5
Source	SRR3042548
Length	24
Mature sequence(if miRNA)	188 - UUUGAGGUAGUAGAUCAUAUCCAA - 211
Stem-loop(if miRNA)	-- A                     C  C        A      C  A      AG            C  A        A       -----   UAGACAGCCUAA   G AUAUGAUCUAUUAUCUUAAAA UG UUGUAUAC AAAAAU AU UGAUUU  AGAUCUCUAGCC AU CAUCAAGU GUCAAAA     AUU            A   | ||||||||||||||||||||| || |||||||| |||||| || ||||||  |||||||||||| || |||||||| |||||||     |||   C UAUACUAGAUGAUGGAGUUUU AC AACGUAUG UUUUUA UA ACUAAA  UCUAGAGAUCGG UA GUAGUUCA UAGUUUU     UAG            U AA C                     A  A        G      A  G      CU            A  C        C       UUAUA   AUUAAGUUAAAA
Stem-loop sequence	GAAUAUGAUCUAUUAUCUUAAAACUGCUUGUAUACAAAAAAUCAUAUGAUUUAGAGAUCUCUAGCCCAUACAUCAAGUAGUCAAAAAUUUAGACAGCCUAAAUAAAAUUGAAUUAGAUAUAUUUUUUGAUCACUUGAUGCAUAGGCUAGAGAUCUUCAAAUCAGAUAAUUUUUGGUAUGCAAACAAUUUUGAGGUAGUAGAUCAUAUCCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019847239.1	ncRNA:24   AACCUAUACUAGAUGAUGGAGUUU   1   ||**||=|||||||||=||||||| targets:3501   UUAAAUGUGAUCUACUGCCUCAAA   3524 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_019847213.1	ncRNA:24   AACCUAUACUAGAUGAUGGAGUUU   1   ||**||=|||||||||=||||||| targets:3974   UUAAAUGUGAUCUACUGCCUCAAA   3997 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_019847185.1	ncRNA:24   AACCUAUACUAGAUGAUGGAGUUU   1   ||**||=|||||||||=||||||| targets:3977   UUAAAUGUGAUCUACUGCCUCAAA   4000 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X1, mRNA	NA	coding protein	psRNATarget