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BaseInfo

ncRNA ID novel_egu_miR786
Species Elaeis guineensis
Class miRNA
Genome position Chr10:8254539-8254662 [-]
Reference genome EG5
Source SRR3042548
Length 21
Mature sequence(if miRNA) 104 - AUAUGAUUUGAAGACCUCUAG - 124
Stem-loop(if miRNA) --          A             --      UA    A       AUACAUCUAAUUCAAU
  AUAUGAUUUG AGACCUCUAGCCU  UUGUCA  AAUG UCAAAAA                U
  |||||||||| |||||||||||||  ||||||  |||| |||||||
  UAUAUUAAAC UUUGGGGAUCGGA  AAUAGU  UUAU AGUUUUU                U
AG          C             UA      --    C       AACCUAUCGAAUUUAU
Stem-loop sequence AUAUGAUUUGAAGACCUCUAGCCUUUGUCAUAAAUGAUCAAAAAAUACAUCUAAUUCAAUUUUAUUUAAGCUAUCCAAUUUUUGACUAUUUGAUAAAUAGGCUAGGGGUUUCCAAAUUAUAUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019847239.1
ncRNA:21   GAUCUCCAGAAGUUUAGUAUA   1
  |||*=||||||||||||||||
targets:3648   CUAAGGGUCUUCAAAUCAUAU   3668

2.0 PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X3, mRNA NA coding protein psRNATarget
XM_019847213.1
ncRNA:21   GAUCUCCAGAAGUUUAGUAUA   1
  |||*=||||||||||||||||
targets:4121   CUAAGGGUCUUCAAAUCAUAU   4141

2.0 PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X2, mRNA NA coding protein psRNATarget
XM_019847185.1
ncRNA:21   GAUCUCCAGAAGUUUAGUAUA   1
  |||*=||||||||||||||||
targets:4124   CUAAGGGUCUUCAAAUCAUAU   4144

2.0 PREDICTED: Elaeis guineensis regulator of telomere elongation helicase 1 (LOC105031928), transcript variant X1, mRNA NA coding protein psRNATarget