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BaseInfo

ncRNA ID	novel_egu_miR785
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr10:9326883-9327026 [-]
Reference genome	EG5
Source	SRR3042548
Length	21
Mature sequence(if miRNA)	1 - UCGCGCGAAGGAAGACGAAUC - 21
Stem-loop(if miRNA)	--    C C       G     UC         -CUU G       U  -   GG     UGCGCA       AAU   UUCG C UCCUUCG GCGAA  CACCGUUGG    C CCACCGC CG CUU  AGAGC      UCGGAUG   G   |||| | ||||||| |||||  |||||||||    | ||||||| || |||  |||||      |||||||   AAGC G AGGAAGC CGCUU  GUGGCAACC    G GGUGGCG GU GAG  UUUCG      GGCUUGC   A CU    A A       G     --         UACU -       U  A   AG     ---CUA       GCA
Stem-loop sequence	UUCGCCCUCCUUCGGGCGAAUCCACCGUUGGCUUCGCCACCGCUCGCUUGGAGAGCUGCGCAUCGGAUGAAUGAACGCGUUCGGAUCGCUUUGAGAGAUGUGCGGUGGGUCAUCCAACGGUGUUCGCGCGAAGGAAGACGAAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JO089609.1	ncRNA:21   CUAAGCAGAAGGAAGCGCGCU   1   |||||**|||||||||||||| targets:553   GAUUCACCUUCCUUCGCGCGA   573 Target Full Sequence	2.0	TSA: Elaeis guineensis isotig02356.Elguifruit mRNA sequence	NA	coding protein	psRNATarget
JO089611.1	ncRNA:21   CUAAGCAGAAGGAAGCGCGCU   1   |||||**|||||||||||||| targets:645   GAUUCACCUUCCUUCGCGCGA   665 Target Full Sequence	2.0	TSA: Elaeis guineensis isotig02358.Elguifruit mRNA sequence	NA	coding protein	psRNATarget
XM_010940833.2	ncRNA:21   CUAAGCAGAAGGAAGCGCGCU   1   |||||**|||||||||||||| targets:1505   GAUUCACCUUCCUUCGCGCGA   1525 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis probable N-acetyltransferase HLS1 (LOC105058055), mRNA	NA	coding protein	psRNATarget
XM_010918220.2	ncRNA:21   CUAAGCAGAAGGAAGCGCGCU   1   |=|||**|||||||||||||| targets:72   GGUUCACCUUCCUUCGCGCGA   92 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis uncharacterized LOC105041308 (LOC105041308), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_010918218.2	ncRNA:21   CUAAGCAGAAGGAAGCGCGCU   1   |=|||**|||||||||||||| targets:70   GGUUCACCUUCCUUCGCGCGA   90 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis uncharacterized LOC105041308 (LOC105041308), transcript variant X1, mRNA	NA	coding protein	psRNATarget
GBSV01050611.1	ncRNA:21   CUAAGCAGAAGGAAGCGCGCU   1   |*||**||||||||||||||| targets:94   GCUUAAUCUUCCUUCGCGCGA   114 Target Full Sequence	2.0	TSA: Elaeis guineensis Unigene32453_All transcribed RNA sequence	NA	coding protein	psRNATarget