ncRNA ID | novel_egu_miR773 |
Species | Elaeis guineensis |
Class | miRNA |
Genome position | Chr1:1257243-1257381 [-] |
Reference genome | EG5 |
Source | SRR3042548 |
Length | 24 |
Mature sequence(if miRNA) | 116 - AGAACUGACGAGGUCUGGCGGUUG - 139 |
Stem-loop(if miRNA) |
--A      AC        GC     UA  G GACCAGGGGAGUCGACCGACCCUAGGUCGGUAGCCAGCC    GAACUG  GAGGUCUG  GGUUG  CG C                                       G    ||||||  ||||||||  |||||  || |    CUUGGC  CUCCAGAC  CCGGC  GA G                                       A UGA      -C        UA     -U  - UGUAUUUUGAGCGGCUGGUUGCCUCCUCGGGCUGCGGUG |
Stem-loop sequence | AGAACUGACGAGGUCUGGCGGUUGUACGGCGACCAGGGGAGUCGACCGACCCUAGGUCGGUAGCCAGCCGAGUGGCGUCGGGCUCCUCCGUUGGUCGGCGAGUUUUAUGUGAGUCGGCCAUCAGACCUCCCGGUUCAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
GBSV01017552.1 |
|
0.0 | TSA: Elaeis guineensis CL6671.Contig1_All transcribed RNA sequence | NA | coding protein | psRNATarget |