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BaseInfo

ncRNA ID novel_egu_miR772
Species Elaeis guineensis
Class miRNA
Genome position Chr11:5421940-5421982 [-]
Reference genome EG5
Source SRR3042548
Length 21
Mature sequence(if miRNA) 1 - UUUGCCGGCUUCACUAUUUCA - 21
Stem-loop(if miRNA) --AAAC              U
      AGUGAAGUCGGCAA C
      |||||||||||||| G
      UCACUUCGGCCGUU G
ACUUUA              U
Stem-loop sequence AAACAGUGAAGUCGGCAAUCGGUUUGCCGGCUUCACUAUUUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010914526.2
ncRNA:21   ACUUUAUCACUUCGGCCGUUU   1
  |*|=||=||||||||||||||
targets:202   UCAGAUGGUGAAGCCGGCAAA   222

2.0 PREDICTED: Elaeis guineensis proteasome subunit beta type-5-like (LOC105038655), mRNA NA coding protein psRNATarget
XM_010922482.2
ncRNA:21   ACUUUAUCACUUCGGCCGUUU   1
  **|||||*||||||=||||||
targets:3298   AAAAAUAAUGAAGCUGGCAAA   3318

2.5 PREDICTED: Elaeis guineensis uncharacterized LOC105044535 (LOC105044535), transcript variant X2, mRNA NA coding protein psRNATarget