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BaseInfo

ncRNA ID	novel_egu_miR762
Species	Elaeis guineensis
Class	miRNA
Genome position	Chr1:31132764-31132899 [-]
Reference genome	EG5
Source	SRR3042548
Length	23
Mature sequence(if miRNA)	1 - AUGGAUUCGUGCGAAGGAAGGUG - 23
Stem-loop(if miRNA)	--           C        C    C     C C    -CA G   UAAAG GUUC     UC  C   UCUUCCUUCGC CGAAUUCA CGUU GAUCA C ACUG   C UCU     C    CGACC  AG A   ||||||||||| |||||||| |||| ||||| | ||||   | |||     |    |||||  || U   GGAAGGAAGCG GCUUAGGU GCAA CUAGU G UGGC   G AGA     G    GCUGG  UC U GU           U        A    C     A C    CAG G   CUCUA ACAC     CC  A
Stem-loop sequence	UCUUCCUUCGCCCGAAUUCACCGUUCGAUCACCCACUGCACGUCUUAAAGCGUUCCGACCUCAGCAUUACUCCGGUCGCACAGAUCUCAGAGGGACCGGUCGAUGAUCCAACGAUGGAUUCGUGCGAAGGAAGGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
GBSV01035645.1	ncRNA:23   GUGGAAGGAAGCGUGCUUAGGUA   1   |||||||||*||||||||||||* targets:232   CACCUUCCUCCGCACGAAUCCAC   254 Target Full Sequence	2.0	TSA: Elaeis guineensis Unigene17480_All transcribed RNA sequence	NA	coding protein	psRNATarget
XM_010940690.2	ncRNA:23   GUGGAAGGAAGCGUGCUUAGGUA   1   ****||=|||||||||||||||* targets:1421   AUAGUUUCUUCGCACGAAUCCAA   1443 Target Full Sequence	2.0	PREDICTED: Elaeis guineensis uncharacterized LOC105057956 (LOC105057956), mRNA	NA	coding protein	psRNATarget
XM_010918218.2	ncRNA:23   GUGGAAGGAAGCGUGCUUAGGUA   1   |||||||||||||=||||||||* targets:74   CACCUUCCUUCGCGCGAAUCCAC   96 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis uncharacterized LOC105041308 (LOC105041308), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010918220.2	ncRNA:23   GUGGAAGGAAGCGUGCUUAGGUA   1   |||||||||||||=||||||||* targets:76   CACCUUCCUUCGCGCGAAUCCAC   98 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis uncharacterized LOC105041308 (LOC105041308), transcript variant X3, mRNA	NA	coding protein	psRNATarget
JO089611.1	ncRNA:23   GUGGAAGGAAGCGUGCUUAGGUA   1   |||||||||||||=||||||||* targets:649   CACCUUCCUUCGCGCGAAUCCAC   671 Target Full Sequence	2.5	TSA: Elaeis guineensis isotig02358.Elguifruit mRNA sequence	NA	coding protein	psRNATarget
JO089609.1	ncRNA:23   GUGGAAGGAAGCGUGCUUAGGUA   1   |||||||||||||=||||||||* targets:557   CACCUUCCUUCGCGCGAAUCCAC   579 Target Full Sequence	2.5	TSA: Elaeis guineensis isotig02356.Elguifruit mRNA sequence	NA	coding protein	psRNATarget
XM_010910681.2	ncRNA:23   GUGGAAGGAAGCGUGCUUAGGUA   1   =|||||||||||||=|||||||* targets:3753   UACCUUCCUUCGCAUGAAUCCAC   3775 Target Full Sequence	2.5	PREDICTED: Elaeis guineensis flowering time control protein FPA (LOC105035213), transcript variant X2, mRNA	NA	coding protein	psRNATarget