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BaseInfo

ncRNA ID ath-miRf10925-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - GGAAAACAGAGCAUGAUGAUGA - NA
Stem-loop(if miRNA) U     --             UGAUGAU     AAA  UGCCAC     UCAAAAUUCAUGU
 UGAAA  GGAAAACAGAGCA       GAGAA   UG      UGAAU             U
 |||||  |||||||||||||       |||||   ||      |||||
 ACUUU  UCUUUUGUCUCGU       CUCUU   AC      CAACA             G
A     UC             --UAAGU     GAA  ---UUC     UAUUAUUUAUAUA
Stem-loop sequence UUGAAAGGAAAACAGAGCAUGAUGAUGAGAAAAAUGUGCCACUGAAUUCAAAAUUCAUGUUGAUAUAUUUAUUAUACAACCUUCAAAGUUCUCUGAAUUGCUCUGUUUUCUCUUUUCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_111149.3
ncRNA:22   AGUAGUAGUACGAGACAAAAGG   1
  ||||||||||||*|||||||||
targets:347   UCAUCAUCAUGCACUGUUUUCC   368

1.5 Arabidopsis thaliana Protein kinase superfamily protein mRNA Protein kinase superfamily protein(AT3G02810) coding protein psRNATarget
BT004041.1
ncRNA:22   AGUAGUAGUACGAGACAAAAGG   1
  ||||||||||||*|||||||||
targets:193   UCAUCAUCAUGCACUGUUUUCC   214

1.5 Arabidopsis thaliana clone RAFL15-02-J08 (R20396) putative protein kinase (At3g02810) mRNA, complete cds NA coding protein psRNATarget
NM_129747.5
ncRNA:22   AGUAGUAGUACGAGACAAAAGG   1
  |*||||||=*||||||||||||
targets:330   UAAUCAUCGAGCUCUGUUUUCC   351

2.5 Arabidopsis thaliana Uncharacterized protein mRNA hypothetical protein(AT2G41830) coding protein psRNATarget
AK228642.1
ncRNA:22   AGUAGUAGUACGAGACAAAAGG   1
  |*||||||=*||||||||||||
targets:287   UAAUCAUCGAGCUCUGUUUUCC   308

2.5 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL15-48-K17 NA coding protein psRNATarget