ncRNA ID | ath-miRf10925-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 22 |
Mature sequence(if miRNA) | NA - GGAAAACAGAGCAUGAUGAUGA - NA |
Stem-loop(if miRNA) |
U     --             UGAUGAU     AAA  UGCCAC     UCAAAAUUCAUGU  UGAAA  GGAAAACAGAGCA       GAGAA   UG      UGAAU             U  |||||  |||||||||||||       |||||   ||      |||||  ACUUU  UCUUUUGUCUCGU       CUCUU   AC      CAACA             G A     UC             --UAAGU     GAA  ---UUC     UAUUAUUUAUAUA |
Stem-loop sequence | UUGAAAGGAAAACAGAGCAUGAUGAUGAGAAAAAUGUGCCACUGAAUUCAAAAUUCAUGUUGAUAUAUUUAUUAUACAACCUUCAAAGUUCUCUGAAUUGCUCUGUUUUCUCUUUUCAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_111149.3 |
|
1.5 | Arabidopsis thaliana Protein kinase superfamily protein mRNA | Protein kinase superfamily protein(AT3G02810) | coding protein | psRNATarget | |||||||||
BT004041.1 |
|
1.5 | Arabidopsis thaliana clone RAFL15-02-J08 (R20396) putative protein kinase (At3g02810) mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_129747.5 |
|
2.5 | Arabidopsis thaliana Uncharacterized protein mRNA | hypothetical protein(AT2G41830) | coding protein | psRNATarget | |||||||||
AK228642.1 |
|
2.5 | Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL15-48-K17 | NA | coding protein | psRNATarget |